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FCS Express Knowledge Base

If the gate extends outside the plot area, does it extend to infinity?

No. The gate does extend into the space outside the plot area, but not to infinity.

 

An example of extending the gate outside the plot area

In the example below, plot is formatted such that the Resolution Minimum is 0 on the X and Y axis.

 

 

Suppose we extend the bottom and right borders of the gate so that they are outside the plot area.

 

In this case, three corners of the gate have coordinates outside the plot area. However, the gate borders are not necessarily including the data points with the lowest APC-Cy7 and PE-Cy7 intensities.

This can be demonstrated by setting the Resolution Minimum of the plot axes to a lower value (-10,000). In the image below, you can see that there are still some events on the plot that are located to the left of the gate and below the gate.

 

For comparison, the initial gate position is shown below, but with the Resolution minimum set to -10,000 on the axes.

 

 

If you want to ensure the entire population of interest is included in a particular gate: